As an important process analysis tool, near infrared spectroscopy (NIRS) has been widely used in process monitoring. In the present work, the feasibility of NIRS for monitoring the moisture content of human coagulation factor VIII (FVIII) in freeze-drying process was investigated. A partial least squares regression (PLS-R) model for moisture content determination was built with 88 samples. Different pre-processing methods were explored, and the best method found was standard normal variate (SNV) transformation combined with 1st derivation with Savitzky– Golay (SG) 15 point smoothing. Then, four different variable selection methods, including uninformative variable elimination (UVE), interval partial least squares regression (iPLS), competitive adaptive reweighted sampling (CARS) and manual method, were compared for eliminating irrelevant variables, and iPLS was chosen as the best variable selection method. The correlation coe±cient (R), correlation coe±cient of calibration set (R_cal), correlation coe±cient of validation set (R_val), root mean square errors of cross-validation (RMSECV) and root mean square errors of prediction (RMSEP) of PLS model were 0.9284, 0.9463, 0.8890, 0.4986% and 0.4514%, respectively. The results showed that the model for moisture content determination has a wide range, good linearity, accuracy and precision. The developed approach was demonstrated to be a potential for monitoring the moisture content of FVIII in freeze-drying process.